BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H02LP1|AL430610
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig772 1295 0.0
>3x_Contig772
Length = 2243
Score = 1295 bits (653), Expect = 0.0
Identities = 664/667 (99%), Gaps = 1/667 (0%)
Strand = Plus / Minus
Query: 255 cccaaaactaaactagggcttccatgagatctagttgtattactagcggacttttcatac 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2243 cccaaaactaaactagggcttccatgagatctagttgtattactagcggactttt-atac 2185
Query: 315 aatttcttaatttcttcgaaagtggtaccgttttcatatagtaatggtaaaacgacaccg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 aatttcttaatttcttcgaaagtggtaccgttttcatatagtaatggtaaaacgacaccg 2125
Query: 375 acgacgtttggaaacatgaaagatttgacaatatccttgttctcagaattcacagctgct 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 acgacgtttggaaacatgaaagatttgacaatatccttgttctcagaattcacagctgct 2065
Query: 435 ttccagatgttcaaagtttcttcgtaaagcagttattctttgaaagaggataacaaatga 494
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2064 ttccagatgttcaaagtttcttcgtaaagcagtaattctttgaaagaggataacaaatga 2005
Query: 495 gcggcaccgtgttcactgactgagacacggttagctaaaatatcaccagagatttcccta 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 gcggcaccgtgttcactgactgagacacggttagctaaaatatcaccagagatttcccta 1945
Query: 555 agcgattcacacaaataattggtcatttccttgtggaaagattgcgaatcataatctggc 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 agcgattcacacaaataattggtcatttccttgtggaaagattgcgaatcataatctggc 1885
Query: 615 ttcttgttcatgctagtcaactgggttctattgaccttcaaagcaacatgcatgagttga 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 ttcttgttcatgctagtcaactgggttctattgaccttcaaagcaacatgcatgagttga 1825
Query: 675 ataaccctacttgcacgatggttgtttaagtctccggtgatgactaactccctgtagata 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 ataaccctacttgcacgatggttgtttaagtctccggtgatgactaactccctgtagata 1765
Query: 735 ttcatactactactgaccgaatcccaaaacaatgaagattgatctaggaatttaccatcg 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 ttcatactactactgaccgaatcccaaaacaatgaagattgatctaggaatttaccatcg 1705
Query: 795 ggggcacgagaggragatgcttccaaacctctggccaaacagtcatccaaggcattaagt 854
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 ggggcacgagaggaagatgcttccaaacctctggccaaacagtcatccaaggcattaagt 1645
Query: 855 ttagagaaagctggagaattaggagagtttttgaaattatcgaattttatgtttcttctt 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 ttagagaaagctggagaattaggagagtttttgaaattatcgaattttatgtttcttctt 1585
Query: 915 aggttgc 921
|||||||
Sbjct: 1584 aggttgc 1578
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6946
Number of Sequences: 1807
Number of extensions: 6946
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)